[gmx-users] g_sas for martini coarse-grained particles
msanku65 at yahoo.com
Sun Jul 18 01:59:05 CEST 2010
I am trying to estimate the solvent accessible surface area of hydrophobic
tails of a martini DPPC lipid bilayer . I was going to use g_sas for that.
But, I observe that this tool gets the vanderwal radii from vdwradii.dat file.
But, since the particles in the martini lipids are united-atom types, I was
wondering what will be a reasonable radius to use for hydrophobic tail particles
of a martini lipid ?
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