[gmx-users] topology for a cyclic peptide

Rebeca García Fandiño regafan at hotmail.com
Mon Jul 19 20:35:41 CEST 2010


I am trying to get  the topology of a cyclic peptide, but when I try to 
do pdb2pgx I get automatically the correction to a terminal one.

I have looked in the Gromacs list and I only have found a entry about 

but I cannot find a solution from there.

Does anyone have any idea about it, please?

Thanks a lot for your help.

Best wishes,

Rebeca García 

Santiago de Compostela University


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