[gmx-users] Ryckaert Bellemanm-dihedral in OPLS-AA
sumanth kumar
sumanthkumar07 at gmail.com
Sat Jul 24 09:15:43 CEST 2010
Dear all,
I had added RB dihedrals in ffoplsaabon.itp in the following way...
P O2 O2 O2 3 0.00000 0.00000 0.00000
0.00000 0.00000 0.00000 ; TPO
CT OS CT CT_2 3 0.00000 0.00000 0.00000
0.00000 0.00000 0.00000 ; TPO
CT_2 CT N C 3 0.00000 0.00000 0.00000
0.00000 0.00000 0.00000 ; TPO
N CT_2 HC HC 3 0.00000 0.00000 0.00000
0.00000 0.00000 0.00000 ; TPO
CT OS P O2 3 0.00000 0.00000 0.00000
0.00000 0.00000 0.00000 ; TPO
P OS CT CT_2 3 0.00000 0.00000 0.00000
0.00000 0.00000 0.00000 ; TPO
N CT_2 CT OS 3 0.00000 0.00000 0.00000
0.00000 0.00000 0.00000 ; TPO
CT CT_2 C O 3 0.00000 0.00000 0.00000
0.00000 0.00000 0.00000 ; TPO
CT CT_2 N HC 3 0.00000 0.00000 0.00000
0.00000 0.00000 0.00000 ; TPO
HC CT_2 CT OS 3 0.00000 0.00000 0.00000
0.00000 0.00000 0.00000 ; TPO
I dunno how to fill the co-efficient values. so i left it as zero. Will
there be any problem if i leave those values as such?? or i shud change
those values basing on any criteria???
Please reply urgently.
Thanks in advance
sumanth
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