ckutzne at gwdg.de
Mon Jul 26 13:24:04 CEST 2010
from somewhere the information about the 7 nodes must have come.
What are the exact commands you used? What MPI are you using?
On Jul 26, 2010, at 12:35 PM, Jacopo Sgrignani wrote:
> Dear all
> i'm trying to run a MD simulation using domain decomposition but after two
> days i'm only able to get this error:
> There is no domain decomposition for 7 nodes that is compatible with the
> given box and a minimum cell size of 2.37175 nm
> Change the number of nodes or mdrun option -rcon or -dds or your LINCS
> Look in the log file for details on the domain decomposition
> I don't select a number of nodes but i use the default options, but the
> simulation does not run.
> So could you give me advices to run with domain decomp, or where can I
> find exaples about this?
> Thanks a lot
> gmx-users mailing list gmx-users at gromacs.org
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
More information about the gromacs.org_gmx-users