[gmx-users] Fatal error: Atom O in residue CO 1 not found in rtp entry with 3 atoms while sorting atoms

[Mark Abraham]

----- Original Message -----
From: Nilesh Dhumal <ndhumal at andrew.cmu.edu>
Date: Wednesday, June 2, 2010 5:32
Subject: [gmx-users] Fatal error: Atom O in residue CO 1 not found in rtp entry with 3 atoms  while sorting atoms
To: gmx-users at gromacs.org

> Hello,
> 
> I am getting the following error during pdb2gmx.
> 
> Fatal error: Atom O in residue CO 1 not found in rtp entry with 
> 3 atoms 
> while sorting atoms
> 
> I checked the pdb file and ffopls.rtp file also.

We can't help you with this little information... What's your in system? What's residue 1 look like? What's the .rtp entry look like?

Mark