[gmx-users] helical parameters for DNA
shahab.shariati at gmail.com
Tue Jun 8 12:05:17 CEST 2010
Hi gromacs users
I want to simulate pr-dna by gromacs.I read a article (Biophysical Journal
87(6) 3799–3813) inwhich helical parameters for DNA (rise, slide, twist,
roll, tilt, shift) calculated by md simulation, but I did not understand two
How and what command these parameters were calculated?
I read gromacs manual. in that there is only g helix and g helixorient
for Protein specific analysis.
can any body help me how to do this ?
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