[gmx-users] g_rmsf -res
carlajamous at gmail.com
Thu Jun 10 12:03:30 CEST 2010
please I have a question concerning g_rmsf.
I need to compare the RMSF from my initial structure to the RMSF of my
To do so, I need to calculate the average per residue.
When I did
g_rmsf -s .tpr -f .xtc -n .ndx -b xx -e yy -o rmsf
g_rmsf -s .tpr -f .xtc -n .ndx -b xx -e yy -res -o rmsf
I got the same result, when choosing C-alpha for root mean square
So please can anyone explain how can I get the average per residue over a
period of time?
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