[gmx-users] Re: moleculetype CU1+ is redefined
Lucio Ricardo Montero Valenzuela
lucioric at ibt.unam.mx
Mon Jun 14 18:54:39 CEST 2010
You should be careful working with two force fields. They have to be compatible.
See
http://www.gromacs.org/index.php?title=Documentation/How-tos/Parameterization&highlight=mix.
Mensaje citado por afsaneh maleki <maleki.afsaneh at gmail.com>:
> this error is removed. becuse "ion.itp"was included twice in .top and .itp
> files.
> i have included two FF into topology file, one for protein and another one
> for bilayer.
>
> Afsaneh
>
> On Mon, Jun 14, 2010 at 6:07 PM, Vitaly Chaban <vvchaban at gmail.com> wrote:
>
> > > When I generate the tpr file with grompp, I get the following error.
> > > "Fatal error: moleculetype CU1+ is redefined"
> > > I work on membrane protein that have no atomtype CU1+. why i get error on
> > > CU+?
> > > I have cheked [moleculetypes] in toplogy file and there are n't
> > > doplicated.
> > > How to remove this error?
> >
> > How many FF files have you included into the topology file?
> >
> >
> > Dr. Vitaly Chaban
> > --
> > gmx-users mailing list gmx-users at gromacs.org
> > http://lists.gromacs.org/mailman/listinfo/gmx-users
> > Please search the archive at http://www.gromacs.org/search before posting!
> > Please don't post (un)subscribe requests to the list. Use the
> > www interface or send it to gmx-users-request at gromacs.org.
> > Can't post? Read http://www.gromacs.org/mailing_lists/users.php
> >
>
--
Lucio Ricardo Montero Valenzuela
Estudiante de doctorado en Ciencias Bioquímicas
Lab. del Dr. Federico Sánchez
Instituto de Biotecnologia, UNAM
Departamento de Biologia Molecular de Plantas
Av. Universidad 2001, Col. Chamilpa
Cuernavaca 62210
Mexico
----------------------------------------------------------------
Este mensaje fue enviado desde el servidor Webmail del Instituto de Biotecnologia.
More information about the gromacs.org_gmx-users
mailing list