[gmx-users] (no subject)

[Justin A. Lemkul]

munubas at yahoo.com wrote:
> Hi
>  I want to add acetyl group at the N and C  terminal of my protein.
>  
> i.e. CH3-C=O NH QQQ NH CH3 by removing the NH3+ and COO- at the N and C 
> terminal.
> Please suggest what steps I have to follow.

There are no programs in Gromacs that will do that.  You may find some useful 
programs here:

http://www.gromacs.org/Documentation/File_Formats/Coordinate_File#Sources

-Justin

> regards
> M. Baskar
> 
> 

-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

========================================