[gmx-users] g_msd and diffusion coefficent
mark.abraham at anu.edu.au
Tue Jun 29 09:11:01 CEST 2010
----- Original Message -----
From: leila karami <karami.leila1 at gmail.com>
Date: Tuesday, June 29, 2010 16:41
Subject: [gmx-users] g_msd and diffusion coefficent
To: gmx-users at gromacs.org
> Hi gromacs users > > in my system, there are pr, dna, water and Na and I want to obtain diffusion of pr in dna but when I use g_msd command, gromacs says select only 1 group. should be this group pr or dna?
If you mean protein, does it make sense to find the diffusion coefficient of a protein within DNA? What does it make sense to find a diffusion coefficient in?
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