[gmx-users] g_rdf has a huge memory leak.

Tsjerk Wassenaar tsjerkw at gmail.com
Tue Jun 29 16:17:15 CEST 2010


Hi Kun,

Can you tell more about what you are doing? What are you analyzing?
How large is the system? Which groups do you use for analysis. Etc.,
etc. Now, you might be right, but you might as well be jumping to
conclusions.

Cheers,

Tsjerk

On Tue, Jun 29, 2010 at 4:12 PM, Kun Huang <harryhuangkun at gmail.com> wrote:
> Hi everyone:
>
> I am using g_rdf to calculate radial distribution function. However when I
> check the memory usage using top, it seems to me that the code has a huge
> memory leak. My system has 4GB memory but it usually has 40MB free memory
> left after the program finishes.
>
> Does anyone have the same problem before?
>
> Thanks,
> Kun
>
> --
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at http://www.gromacs.org/search before posting!
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/mailing_lists/users.php
>



-- 
Tsjerk A. Wassenaar, Ph.D.

post-doctoral researcher
Molecular Dynamics Group
Groningen Institute for Biomolecular Research and Biotechnology
University of Groningen
The Netherlands



More information about the gromacs.org_gmx-users mailing list