[gmx-users] regarding error in editconf

Justin A. Lemkul jalemkul at vt.edu
Thu Nov 4 13:01:49 CET 2010

Anamika Awasthi wrote:
> Dear friends
>    when I am trying command editconf, it is showing error
> File input/output error
>   I have protein of 700 amino acids  and its of inverted T shape and we 
> are giving boxtype dodecahedron.
> input command is:
>  editconf_d -bt dodecahedron -f input.gro -o box.gro -c -d 10.0

If you're getting an I/O error, then either the input file doesn't exist or you 
don't have permission or sufficient disk space to write the output.  The full 
error message probably would have given more clues, but the reason likely falls 
into one of these categories.


> with regards
> Anamika


Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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