[gmx-users] g_sas resarea.xvg

Justin A. Lemkul jalemkul at vt.edu
Thu Nov 4 13:04:09 CET 2010



Carla Jamous wrote:
> Hi everyone,
> 
> I used g_sas: g_sas -s .tpr -f .xtc -n .ndx -o .xvg -or resarea.xvg
> 
> What I don't understand is why there are 3 columns in the file 
> resarea.xvg although this is what's written in my file:
> # g_sas is part of G R O M A C S:
> #
> # GROtesk MACabre and Sinister
> #
> @    title "Area per residue"
> @    xaxis  label "Residue"
> @    yaxis  label "Area (nm\S2\N)"
> @TYPE xy
> 
> So I would expect this file to contain only two columns. I'm using 
> gromacs version 4.0.3.
> 

Residue, average area, standard deviation.

-Justin

> Thanks for your help,
> Carla
> 

-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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