[gmx-users] Re: trjconv

mohsen ramezanpour ramezanpour.mohsen at gmail.com
Mon Nov 8 10:42:49 CET 2010


Dear Vitaly
rerunning my program take a long time(approximately 12 days),besides I
checked my trojectories and it was completed

On Sun, Nov 7, 2010 at 9:12 PM, Vitaly Chaban <vvchaban at gmail.com> wrote:

> Did you try to re-run your trajectory? Does the problem persist then?
>
>
>
> > I have a trajectory with 20000 frames.
> > i want to separate just 1000 last frames of it in pdb formt and 1000
> first
> > frames too.
> > I entered this command:
> > trjconv  -f  mmm.trr  -o nnn.pdb -s  lll.tpr  -b 800  -e 1000
> >
> > actually my total time is 1000 ps.
> > the process was  not  done completely!
> > when I delete -e option it is done completely but the the result file is
> 0
> > byte,then i can not earn anything.
> > what is the problem?
> >
> > thanks in advance for your comments
> > Mohsen
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