[gmx-users] g_hbond / hbmap.xpm file

Justin A. Lemkul jalemkul at vt.edu
Wed Nov 10 14:08:37 CET 2010

shahab shariati wrote:
> Dear Erik
> Thanks for your attention.
> What is your mean of [but keep in mind that the matrix is displayed with 
> the first row at the bottom].
> Please clarify that more.

The last line of the .xpm file corresponds to the first entry in the H-bonds 
section of the .ndx file, so when mapping the .ndx to the .xpm, read the .xpm 



Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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