[gmx-users] bitinilated peptide

Justin A. Lemkul jalemkul at vt.edu
Mon Nov 15 14:11:26 CET 2010

Gloria Saracino wrote:
> Hi everybody,
> I would like to submit a biotinilated peptide to MD with 53a6 force field. Do 
> you know where I can look for the topology and parameters file? 

I would start with a literature search, then the Users' Contribution section of 
the Gromacs site, then perhaps poke around Google.

If nothing turns up, then you've got a long road of parameterization ahead of you.



> thank you in advance


Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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