[gmx-users] problem linking fftw2 with gromacs 4.5.3
Fabio Affinito
f.affinito at cineca.it
Tue Nov 16 15:57:01 CET 2010
Hi folks,
I'm experiencing some problem when I try to compile gromacs 4.5.3
linking fftw.
This is the configure:
> ./configure --prefix=/bgp/userinternal/cin0644a/gromacs.453 \
> --host=ppc --build=ppc64 --enable-ppc-sqrt=1 \
> --disable-ppc-altivec \
> --enable-bluegene --enable-mpi --with-fft=fftw2 \
> --program-suffix=_mpi_bg_dp \
> --without-x \
> CC=mpixlc_r \
> CFLAGS="-O3 -qarch=450d -qtune=450" \
> MPICC=mpixlc_r CXX=mpixlC_r \
> CXXFLAGS="-O3 -qarch=450d -qtune=450" \
> CPPFLAGS="-I/bgp/userinternal/cin0644a/fftw2/include" \
> F77=mpixlf77_r FFLAGS="-O3 -qarch=auto -qtune=auto" \
> LDFLAGS="-L/bgp/userinternal/cin0644a/fftw2/lib"
This is the error during the make
> mkdir .libs
> libtool: link: cannot find the library `../mdlib/libmd_mpi.la' or unhandled argument `../mdlib/libmd_mpi.la'
> make[1]: *** [libgmxpreprocess_mpi.la] Error 1
> make[1]: Leaving directory `/bgp/userinternal/cin0644a/gromacs-4.5.3/src/kernel'
The directory /lib:
> libfftw.a libfftw_threads.a librfftw.a librfftw_threads.a
> libfftw.la libfftw_threads.la librfftw.la librfftw_threads.la
The directory /include:
> fftw.h fftw_threads.h rfftw.h rfftw_threads.h
Do you have any hint?
Thanks in advance,
Fabio
--
*********************************************
Fabio Affinito, PhD
CINECA
SuperComputing Applications and Innovation Department - SCAI
Via Magnanelli, 6/3
40033 Casalecchio di Reno (Bologna) ITALY
+39/051/6171794 (Phone)
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