[gmx-users] perl script for g_hbond

Justin A. Lemkul jalemkul at vt.edu
Tue Nov 23 19:54:13 CET 2010

Quoting leila karami <karami.leila1 at gmail.com>:

> Dear Justin
> when I use perl HB.pl -s .pdb -map .xpm -index .ndx, I encountered with:
> syntax error at ./HB.pl line 10, near "nothing else"
> "use" not allowed in expression at ./HB.pl line 13, at end of line
> Execution of ./HB.pl aborted due to compilation errors.

By copying and pasting from the email message, you have broken a comment line
such that perl is incorrectly interpreting it.  The first line of code (other
than the line indicating the interpreter is "use strict.". Anything preceded by
# is a comment.


> --
> Leila Karami
> Ph.D. student of Physical Chemistry
> K.N. Toosi University of Technology
> Theoretical Physical Chemistry Group


Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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