[gmx-users] perl script for g_hbond / summary_HBmap.dat

[Erik Marklund]

Well, yes. The 'h' notation is never used in the xpm file. I just 
borrowed it from Luzar and chandler. Every line in the xpm data is the 
h(t) for a particular hydrogen bond.

Erik

leila karami skrev 2010-11-24 16.50:
> Dear Erik
>
> I'm confused. is there h(t) in hbmap.xpm file?
>
> where is h(t)? which output file of g_hbond tool?
>
> -- 
> Leila Karami
> Ph.D. student of Physical Chemistry
>
> K.N. Toosi University of Technology
> Theoretical Physical Chemistry Group
>


-- 
-----------------------------------------------
Erik Marklund, PhD student
Dept. of Cell and Molecular Biology, Uppsala University.
Husargatan 3, Box 596,    75124 Uppsala, Sweden
phone:    +46 18 471 4537        fax: +46 18 511 755
erikm at xray.bmc.uu.se    http://folding.bmc.uu.se/