[gmx-users] Simulations on GPU

[Szilárd Páll]

Dear Igor,

Your output look _very_ weird, it seems as if CMake internal
variable(s) were not initialized, which I have no clue how could have
happened - the build generator works just fine for me. The only thing
I can think of is that maybe your CMakeCache is corrupted.

Could you please rerun cmake in a _clean_ build directory? Also, are
you able to run cmake for CPU build (no -D options)?

--
Szilárd



On Wed, Oct 6, 2010 at 2:48 AM, Igor Leontyev <ileontyev at ucdavis.edu> wrote:
> Szilárd wrote:
>>
>> The beta versions are all outdated, could you please use the latest
>> source distribution (4.5.1) instead (or git from the
>> release-4-5-patches branch)?
>
> The result is the same for both the distribution 4.5.1 and git from the
> release-4-5-patches. See the output bellow.
> =========================================
>
> PATH=/usr/local/opt/bin/mpi/openmpi-1.4.2/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
> LD_LIBRARY_PATH=/usr/local/opt/bin/mpi/openmpi-1.4.2/lib:/home/leontyev/programs/bin/cuda/lib64:
> CPPFLAGS=-I//usr/local/opt/bin/gromacs/fftw-3.2.2/single_sse/include
> -I//usr/local/opt/bin/mpi/openmpi-1.4.2/include
> LDFLAGS=-L//usr/local/opt/bin/gromacs/fftw-3.2.2/single_sse/lib
> -L//usr/local/opt/bin/mpi/openmpi-1.4.2/lib
> OPENMM_ROOT_DIR=/home/leontyev/programs/bin/gromacs/gromacs-4.5.1-git/openmm
>
> cmake src -DGMX_OPENMM=ON -DGMX_THREADS=OFF
> -DCMAKE_INSTALL_PREFIX=/home/leontyev/programs/bin/gromacs/gromacs-4.5.1-git
> CMake Error at gmxlib/CMakeLists.txt:124 (set_target_properties):
>  set_target_properties called with incorrect number of arguments.
>
>
> CMake Error at gmxlib/CMakeLists.txt:126 (install):
>  install TARGETS given no ARCHIVE DESTINATION for static library target
>  "gmx".
>
>
> CMake Error at mdlib/CMakeLists.txt:11 (set_target_properties):
>  set_target_properties called with incorrect number of arguments.
>
>
> CMake Error at mdlib/CMakeLists.txt:13 (install):
>  install TARGETS given no ARCHIVE DESTINATION for static library target
>  "md".
>
>
> CMake Error at kernel/CMakeLists.txt:43 (set_target_properties):
>  set_target_properties called with incorrect number of arguments.
>
>
> CMake Error at kernel/CMakeLists.txt:44 (set_target_properties):
>  set_target_properties called with incorrect number of arguments.
>
>
> CMake Error at kernel/gmx_gpu_utils/CMakeLists.txt:18
> (CUDA_INCLUDE_DIRECTORIES):
>  Unknown CMake command "CUDA_INCLUDE_DIRECTORIES".
>
>
> CMake Warning (dev) in CMakeLists.txt:
>  No cmake_minimum_required command is present.  A line of code such as
>
>   cmake_minimum_required(VERSION 2.8)
>
>  should be added at the top of the file.  The version specified may be lower
>  if you wish to support older CMake versions for this project.  For more
>  information run "cmake --help-policy CMP0000".
> This warning is for project developers.  Use -Wno-dev to suppress it.
>
> -- Configuring incomplete, errors occurred!
>
> --
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