[gmx-users] do_dssp failed to execute

Sunita Patel sunita at mailhost.tifr.res.in
Mon Oct 11 13:23:26 CEST 2010

Dear User,

I set the path for dssp executable in .bashrc file. Still getting following
error. Could anybody suggest what would be the problem. 

********************************error message********
Select a group: 5
Selected 5: 'MainChain'
There are 134 residues in your selected group
Opening library file /home/sunita/soft/gromacs/share/gromacs/top/ss.map
Reading frame       0 time    0.000   
Back Off! I just backed up dd3sOJn3 to ./#dd3sOJn3.1#

Program do_dssp, VERSION 4.0.7
Source code file: do_dssp.c, line: 471

Fatal error:
Failed to execute command: /home/sunita/soft/bin -na dd3sOJn3 ddZl9dcf >
/dev/null 2> /dev/null



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