[gmx-users] Gromacs installation problem @ RHEL5.5 server

[Sathish]

Dear Mark,
      Thanks for your reply. In my server gromacs installed at
"local/gromacs". I have checked out point 8 as you mentioned.
It was working with this "source /local/gromacs/bin/GMXRC" command.
and also tried , entered  "local/gromacs/bin" path and calling to GMXRC but
it shows error

[root at xxx bin]# GMXRC
/local/gromacs/bin/GMXRC: line 35: return: can only `return' from a function
or
sourced script
/local/gromacs/bin/GMXRC: line 44: CSH:: command not found
/local/gromacs/bin/GMXRC.csh: line 8: syntax error near unexpected token
`setenv
'
/local/gromacs/bin/GMXRC.csh: line 8: `if (! $?LD_LIBRARY_PATH) setenv
LD_LIBRAR
Y_PATH ""'
[root at xxx bin]#

kindly help me to fix this problem and  luck is not working.




On Wed, Oct 13, 2010 at 12:57 PM, Mark Abraham <mark.abraham at anu.edu.au>wrote:

>
>
> ----- Original Message -----
> From: Sathish <sathisbioinfo at gmail.com>
> Date: Wednesday, October 13, 2010 14:31
> Subject: [gmx-users] Gromacs installation problem @ RHEL5.5 server
> To: gmx-users at gromacs.org
>
> > Dear all,
> > I have compiled and installed gromacs 4.5.1 on RHEL5.5 server. I have
> also installed openmpi-1.2.8, fftw-3.2.2 and gsl-1.11. After gromacs 4.5.1
> installation did make tests and make links. Finally got message "GROMACS is
> installed under /root/software" and  "binary executable installed
> /usr/local/bin". Utill this am not getting any errors.
> > Then i was tried to calling "luck" but get "command not found".I have
> searched the forum it says binary executable not in your path.
> > Am installing first time and need to know PATH is right which i given?
> Could anybody help me to solve this problem?
> > Advance thanks..
>
> Check out point 8 of
> http://www.gromacs.org/Downloads/Installation_Instructions
>
> Mark
> --
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>



-- 
-- 
Regards,
N. Sathishkumar,
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20101013/6c47fd56/attachment.html>