[gmx-users] Reg:Using Trjconv to combine two gro r pdb files

Mark Abraham mark.abraham at anu.edu.au
Mon Oct 25 11:44:02 CEST 2010



----- Original Message -----
From: vinothkumar mohanakrishnan <kmvinoth at gmail.com>
Date: Monday, October 25, 2010 19:31
Subject: [gmx-users] Reg:Using Trjconv to combine two gro r pdb files
To: Discussion list for GROMACS users <gmx-users at gromacs.org>

> Hi gromacians >   > I want to know how in the methanol-water tutorial (http://manual.gromacs.org/current/online/mixed.html) they generated mixed.pdb or conf.gro (usr/local/gromacs/share/gromacs/tutor/mixed)

Maybe by concatenating two suitable single-solvent boxes. Or, you could start with a box of methol, increase its dimensions with a text editor, and then genbox to insert water solvent.

Mark

> using trjconv? any help is highly appreciated.  >   > Regards > Vinoth >   > -- 
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