[gmx-users] mirror reflection

#ZHAO LINA# ZHAO0139 at e.ntu.edu.sg
Tue Oct 26 14:47:53 CEST 2010


Cool, but what if the mirror was set on y=-x in the x-y plane. 

________________________________________
From: gmx-users-bounces at gromacs.org [gmx-users-bounces at gromacs.org] on behalf of Tsjerk Wassenaar [tsjerkw at gmail.com]
Sent: Tuesday, October 26, 2010 8:12 PM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] mirror reflection

editconf -scale -1 -1 -1

On Tue, Oct 26, 2010 at 12:56 PM, Erik Marklund <erikm at xray.bmc.uu.se> wrote:
> #ZHAO LINA# skrev 2010-10-26 11.46:
>
>  Hi,
>
> which can help to get the mirror reflection of a known protein?
>
> Thanks,
>
> lina
>
> If it's just one conformation, then I'd just write a script that multiplies
> all x-, y- or z-coordinates by -1 in a pdb- or gro-file. Is that what you're
> after, or is it something more intricate?
>
> Cheers,
>
> --
> -----------------------------------------------
> Erik Marklund, PhD student
> Dept. of Cell and Molecular Biology, Uppsala University.
> Husargatan 3, Box 596,    75124 Uppsala, Sweden
> phone:    +46 18 471 4537        fax: +46 18 511 755
> erikm at xray.bmc.uu.se    http://folding.bmc.uu.se/
>
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--
Tsjerk A. Wassenaar, Ph.D.

post-doctoral researcher
Molecular Dynamics Group
* Groningen Institute for Biomolecular Research and Biotechnology
* Zernike Institute for Advanced Materials
University of Groningen
The Netherlands
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