[gmx-users] LINCS vs SHAKE

Sai Pooja saipooja at gmail.com
Sat Oct 30 21:38:31 CEST 2010


For Replica exchange, is there any advantage of in using SHAKE over
LINCS(other than the stepsize)?
 I am running an REM simulation and the simulation stops after running for
variable number of steps (100000, 10000000 etc.) because some bond moves
more than 30 degrees and LINCS gives a warning.


Pooja

-- 
Quaerendo Invenietis-Seek and you shall discover.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20101030/14ab58cb/attachment.html>


More information about the gromacs.org_gmx-users mailing list