[gmx-users] intermolecular distance restrains

[Justin A. Lemkul]

nahren manuel wrote:
> Dear Gromacs Users,
> 
> I am presently using gromacs4.5 beta(since I want implicit solvent). I 

No need to use a beta version, the official 4.5 has been released.

> wish to apply intermolecular distance restraints.
> To my surprise there is no merge option in pdb2gmx (although pdb2gnx -h, 
> says it has). So is there a new alternative to create intermolecular 
> distance restrains.
> 

Use pdb2gmx -chainsep.

-Justin

> Best,
> nahren
> 
> 

-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

========================================