[gmx-users] about Rg
lecielll at googlemail.com
Sat Sep 4 21:48:46 CEST 2010
Now I am using g_polystat for calculating Rg. However results are pretty
similar to those obtained from g_gyrate. The command line I am using is
g_polystat -f *.trr -s *.tpr -o polystat-mw -n *.ndx -mw -xvgr -w
- I noticed -mw option does not change Rg. Also When I choose all chains in
index file Rg is exactly the same as choosinfg only the first chain! For
other chains Rg is different. Is it possible to get average Rg of all
chains? and compare with one single chain?
- I tried to get persistent length as well but -p option is not working. the
output file -p persist.xvg:
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