[gmx-users] parallel run problem for nwall

Yi Gao t218gy at gmail.com
Fri Sep 10 04:42:08 CEST 2010


Gromacs is running well on multi-nodes without nwall. But with nwall, it
doesn't work.
Yi
On Thu, Sep 9, 2010 at 9:28 PM, Mark Abraham <mark.abraham at anu.edu.au>wrote:

>
>
> ----- Original Message -----
> From: Yi Gao <t218gy at gmail.com>
> Date: Friday, September 10, 2010 12:23
> Subject: [gmx-users] parallel run problem for nwall
> To: gmx-users at gromacs.org
>
> > Dear Sir,
> >
>   > I am using nwall to run my system. My version is Gromacs 4.0.7.
> Interestingly, I could parallel run my system on 1 node with 4 or 8 cpus,
> but when I run it on multi-node PC-cluster, it always fails and gives no
> message at all. I wonder if you could help me to resolve this problem?
> Thanks a lot!
>
> First, find out if your MPI is configured to use the multiple nodes, e.g.
> with a hostfile.
>
> Mark
>
> --
> gmx-users mailing list    gmx-users at gromacs.org
> http://lists.gromacs.org/mailman/listinfo/gmx-users
> Please search the archive at
> http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
> Please don't post (un)subscribe requests to the list. Use the
> www interface or send it to gmx-users-request at gromacs.org.
> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://maillist.sys.kth.se/pipermail/gromacs.org_gmx-users/attachments/20100909/0c090bf9/attachment.html>


More information about the gromacs.org_gmx-users mailing list