[gmx-users] xpm2ps failure - memory allocation

[Berk Hess]

Hi,

There were several issues which I fixed.
But my test file/system did not give problems with the buggy code.
Could you test it on your system (use release-4-5-patches)?

Thanks,


> Date: Tue, 14 Sep 2010 09:12:18 -0400
> From: jalemkul at vt.edu
> To: gmx-users at gromacs.org
> Subject: [gmx-users] xpm2ps failure - memory allocation
> 
> 
> Hi All,
> 
> I'm having a problem with xpm2ps failing in both version 4.5 and the current git 
> version (pulled just a few minutes ago).  The program exits with:
> 
> xpm2ps(24704) malloc: *** error for object 0x803201: pointer being reallocated 
> was not allocated
> *** set a breakpoint in malloc_error_break to debug
> 
> -------------------------------------------------------
> Program xpm2ps, VERSION 4.5.1-2010-09-14 13:11:27 +0200-b953b64
> Source code file: smalloc.c, line: 214
> 
> Fatal error:
> Not enough memory. Failed to realloc 10012 bytes for *line, *line=0x803201
> (called from file matio.c, line 197)
> For more information and tips for troubleshooting, please check the GROMACS
> website at http://www.gromacs.org/Documentation/Errors
> -------------------------------------------------------
> 
> "Pump Up the Volume Along With the Tempo" (Jazzy Jeff)
> : Cannot allocate memory
> 
> Version 4.0.7 produces the correct output from the same input files (.xpm and 
> .m2p).  Any ideas?
> 
> -Justin
> 
> -- 
> ========================================
> 
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> MILES-IGERT Trainee
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
> 
> ========================================
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