[gmx-users] MD on docked complex using AMBER FF

[vivek sharma]

Hi There,
I am trying to run molecular dynamics on a drug-enzyme complex using
amber force field. I have done it earlier using gromos FF using
drug-enzyme tutorial, I dont know if the parameter set (.mdp file)
will be same or different while using AMBER FF.
Any insight/comments into the matter may be of help if somebody has
tried using AMBER FF for docked complex in GROMACS.

Thanks in advance.

regards,
Vivek