[gmx-users] Reg: Liquid-liquid interface simulation

[Justin A. Lemkul]

vinothkumar mohanakrishnan wrote:
> why don't someone can post the tutorial in the gromacs website? because 

The implication from my previous message was that, if you cannot find a tutorial 
in an obvious place, one does not exist.  There is not a tutorial for every task 
that a user may wish to undertake; such a feat would be impossible.

> gromacs was heavily used for liquid-liquid interface simulation.I hope 
> probably i will do it in the near future.
>  

Just because the software has been used for a specific purpose does not 
necessitate the existence of a tutorial.  People who do the simulations do not 
always have the time to write up (and subsequently maintain) tutorial materials.

If you come up with a tutorial, please post it to the Gromacs site.

-Justin

> Regards
> Vinoth
> 
> On Tue, Sep 28, 2010 at 4:05 PM, Justin A. Lemkul <jalemkul at vt.edu 
> <mailto:jalemkul at vt.edu>> wrote:
> 
> 
> 
>     vinothkumar mohanakrishnan wrote:
> 
>         Is there any tutorial for liquid-liquid interface in any of the
>         website?.
>          
> 
> 
>     If you can't find it at
>     http://www.gromacs.org/Documentation/Tutorials or with Google, then
>     it probably doesn't exist.
> 
>     -Justin
> 
>         Regards
>         Vinoth
> 
> 
>         On Tue, Sep 28, 2010 at 2:01 PM, David van der Spoel
>         <spoel at xray.bmc.uu.se <mailto:spoel at xray.bmc.uu.se>
>         <mailto:spoel at xray.bmc.uu.se <mailto:spoel at xray.bmc.uu.se>>> wrote:
> 
>            On 2010-09-28 09.58, vinothkumar mohanakrishnan wrote:
> 
>                Hi all
> 
>                Is that any one have liquid-liquid interface simulation (like
>                lysozyme
>                by justin). if so kindly share it through this discussiion
>                forum.it <http://forum.it/> <http://forum.it/>
>                <http://forum.it <http://forum.it/> <http://forum.it/>>
>         will be of great help for
> 
>                the newusers like me to use
> 
>                gromacs for liquid-liquid interface simulation.
> 
>                Regards
>                Vinoth
> 
>            We prefer to keep discussions on the mailing list for more direct
>            impact and for archiving purposes. If there are tutorials or
>         howtos
>            on certain topics they can be uploaded to the website.
> 
>            --     David van der Spoel, Ph.D., Professor of Biology
>            Dept. of Cell & Molec. Biol., Uppsala University.
>            Box 596, 75124 Uppsala, Sweden. Phone:  +46184714205.
>            spoel at xray.bmc.uu.se <mailto:spoel at xray.bmc.uu.se>
>         <mailto:spoel at xray.bmc.uu.se <mailto:spoel at xray.bmc.uu.se>>    
>           http://folding.bmc.uu.se <http://folding.bmc.uu.se/>
>         <http://folding.bmc.uu.se/>
> 
>            --     gmx-users mailing list    gmx-users at gromacs.org
>         <mailto:gmx-users at gromacs.org>
>            <mailto:gmx-users at gromacs.org <mailto:gmx-users at gromacs.org>>
> 
>            http://lists.gromacs.org/mailman/listinfo/gmx-users
>            Please search the archive at
>            http://www.gromacs.org/Support/Mailing_Lists/Search before
>         posting!
>            Please don't post (un)subscribe requests to the list. Use the www
>            interface or send it to gmx-users-request at gromacs.org
>         <mailto:gmx-users-request at gromacs.org>
>            <mailto:gmx-users-request at gromacs.org
>         <mailto:gmx-users-request at gromacs.org>>.
> 
>            Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> 
> 
> 
>     -- 
>     ========================================
> 
>     Justin A. Lemkul
>     Ph.D. Candidate
>     ICTAS Doctoral Scholar
>     MILES-IGERT Trainee
>     Department of Biochemistry
>     Virginia Tech
>     Blacksburg, VA
>     jalemkul[at]vt.edu <http://vt.edu/> | (540) 231-9080
>     http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
> 
>     ========================================
> 
>     -- 
>     gmx-users mailing list    gmx-users at gromacs.org
>     <mailto:gmx-users at gromacs.org>
>     http://lists.gromacs.org/mailman/listinfo/gmx-users
>     Please search the archive at
>     http://www.gromacs.org/Support/Mailing_Lists/Search before posting!
>     Please don't post (un)subscribe requests to the list. Use the www
>     interface or send it to gmx-users-request at gromacs.org
>     <mailto:gmx-users-request at gromacs.org>.
>     Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
> 
> 

-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

========================================