[gmx-users] comm-grps for a membrane-protein-ligand system

Peter C. Lai pcl at uab.edu
Mon Apr 11 06:00:43 CEST 2011

Should I couple a ligand associated with a membrane protein to the same
COM group as the Protein_POPC group? It makes sense to me that would be the 
case since if we are investigating the interaction between protein+membrane 
and ligand we want to have the same COM correction vector applied to both 
relative to SOL_Ions but I just wanted to make sure...

Peter C. Lai                 | University of Alabama-Birmingham
Programmer/Analyst           | BEC 257
Genetics, Div. of Research   | 1150 10th Avenue South
pcl at uab.edu                  | Birmingham AL 35294-4461
(205) 690-0808               |

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