[gmx-users] Adding water to protein to start the simulation process

[Justin A. Lemkul]

Monisha Hajra wrote:
> Hi User,
> 
> I have a protein which I have modeled by Homology modelling. The modeled 
> protein has no water molecules in its surrounding environment.
> 
> How should I add water molecule so that I can start the simulation process?
> 

Please refer to the abundant tutorial material on the website:

http://www.gromacs.org/Documentation/Tutorials#General_GROMACS_Use
http://www.gromacs.org/Documentation/How-tos/Steps_to_Perform_a_Simulation

-Justin

> Regards
> Monisha 
> 

-- 
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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