[gmx-users] error in running jobs in parallel !!!

Mark Abraham Mark.Abraham at anu.edu.au
Sat Apr 16 11:25:38 CEST 2011


On 16/04/2011 7:21 PM, delara aghaie wrote:
> Dear Mark
> What do you mean by running .tpr in serial?
>

The opposite of parallel.

Mark

>
> Thanks in advance
> D.aghaie
>
> --- On *Sat, 4/16/11, Mark Abraham /<Mark.Abraham at anu.edu.au>/* wrote:
>
>
>     From: Mark Abraham <Mark.Abraham at anu.edu.au>
>     Subject: Re: [gmx-users] error in running jobs in parallel !!!
>     To: "Discussion list for GROMACS users" <gmx-users at gromacs.org>
>     Date: Saturday, April 16, 2011, 1:42 PM
>
>     On 16/04/2011 7:06 PM, delara aghaie wrote:
>>     Dear Justin
>>     thanks for your previous explanations.
>>     We are running job with gromacs in parallel. after having the
>>     outpus of the first run, when submitting the jobs for the next
>>     10ns we encounter with this error. can you help me to fix that.
>>     Pleas let me know the possible reasons to see this kind of error.
>>
>
>     Anything could cause that - including some problem with the
>     hardware - and we can see no diagnostic information. Look at the
>     .log file also. Try to run the .tpr in serial.
>
>     Mark
>

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