[gmx-users] binding_affinity

[Justin A. Lemkul]

Justin A. Lemkul wrote:
> 
> 
> shahid nayeem wrote:
>> Hi Justin
>> Thanks a lot. What is the purpose of adding 100mM NaCl. Is it
>> mimicking physiological condition.
> 
> More of a hybrid of physiological and in vitro conditions.  Please see 
> the referenced paper for more details.
> 

...and again, please don't necessarily conclude that just because someone did 
this for a tutorial that you should inherently be doing it for your system.  The 
tutorial is but one example of a workflow, derived from my own specific work. 
Construct a model that is most appropriate to your purposes.

-Justin

-- 
========================================

Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

========================================