[gmx-users] Protein in a solvated box

[Justin A. Lemkul]

simon sham wrote:
> Hi,
> I have protein in a solvated box. When I used VMD to look at the system, 
> I've found that the protein is not located at the center, but rather at 
> the corner section.
> I would like to know why.
> 

FAQ #11:

http://www.gromacs.org/Documentation/FAQs

This should really be #1; it gets asked almost every week...

-Justin

> Thanks for your insight in advance.
> 
> Simon
> 
> 
> 

-- 
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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