[gmx-users] Help with B2AR within the POPC membrane

[Aldo Segura]

Thanks for your answer. You're right in the procedure for the packing
of the protein and lipids. However, after several iterations (~30) the
lipids are packaged to form the bilayer and the protein is outside of
it. I can send you a couple of pictures for a better explanation of my
problem.




Best regards,


Aldo Segura-Cabrera
Laboratorio de Bioinformática
Centro de Biotecnología Genómica
Instituto Politécnico Nacional
Blvd. Del Maestro esquina Elías Piña, 88710
Reynosa, Tamaulipas, México.
(899)9243627 ext. 87747
e-mail: asegurac at ipn.mx; aldosegura at gmail.com