[gmx-users] Re: g_rmsf

[bharat gupta]

Hi,

I want to calculate the RMSF of residues and not of protein ... how can this
be done with g_rmsf..

Also I want to see the rmsf of certain residues .. for which I created the
.ndx file containint those residues only .. and after using g_rmsf with
index file gives the RMSF for whole protein backbone and not for that index
file residues ... what shall I do to have RMSF of index file residues ??

-- 
Bharat
Ph.D. Candidate
Room No. : 7202A, 2nd Floor
Biomolecular Engineering Laboratory
Division of Chemical Engineering and Polymer Science
Pusan National University
Busan -609735
South Korea
Lab phone no. - +82-51-510-3680, +82-51-583-8343
Mobile no. - 010-5818-3680
E-mail : monu46010 at yahoo.com
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