[gmx-users] Gromacs Installation

majid hasan pu_majidhasan at yahoo.com
Tue Feb 15 20:08:52 CET 2011


So, I installed the development package for x-window-system, and reinstalled 
both fftw, and gromacs, and now everything seems fine. I do see the animation 
after running demo.

Thanks,
Majid



________________________________
From: Mark Abraham <Mark.Abraham at anu.edu.au>
To: Discussion list for GROMACS users <gmx-users at gromacs.org>
Sent: Mon, February 14, 2011 9:39:12 PM
Subject: Re: [gmx-users] Gromacs Installation

 On 15/02/2011 4:35 PM, majid hasan wrote: 
Okay, I'll do this. I have also realized after browsing           through 
config.log, that Xlib.h is absent. Where do I get it,           I want it to run 
ngmx.
>
You will need the X windowing system installed, and probably the     associated 
"devel" packages. Use your distribution's package     manager.

Mark



>Thanks,
>Majid
>
>
>
>
________________________________
From: ZHAO Lina <lnzhao99 at gmail.com>
>To: Discussion list for GROMACS users <gmx-users at gromacs.org>
>Sent: Mon,               February 14, 2011 9:07:15 PM
>Subject: Re: [gmx-users] Gromacs Installation
>
>"clean" reinstallation.
>
>make uninstall
>make distclean
>rm -r <the untar one> 
>
>from source re-install it again.
>
>lina
>
>
>On Tue, Feb 15, 2011 at 12:39 PM,               majid hasan 
><pu_majidhasan at yahoo.com> wrote:
>
>Okay. Actually, second time, I over-worte the                       first 
>installation. I mean I didn't uninstall the                       first one, I 
>just ran the whole process again                       starting from 
>fftw$./configure. I am not sure if                       that is all right, I 
>just did it to find out the                       problem. In the third attempt 
>(without issuing                       --enable-shared anywher), I again 
>over-wrote the                       gromacs installation files, and this went 
>well. It                       worked, but I don't know why?
>>
>>
>>Best,
>>Majid
>>
>>
>>
________________________________
 From: ZHAO Lina <lnzhao99 at gmail.com> 
>>
>>To: Discussion list for GROMACS users <gmx-users at gromacs.org>
>>Sent: Mon, February 14, 2011 8:04:38 PM 
>>
>>Subject: Re: [gmx-users] Gromacs Installation
>> 
>>
>>You are right, it's relevant to the shared                           libs.
>>but I don't know why you failed in the second                           attempt 
>>if you did a clean reinstallation.
>>
>>lina
>>
>>
>>
>>
>>
>________________________________
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>in the Yahoo!         Answers Food & Drink Q&A.



 
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