[gmx-users] How to countting Hbonds lifetime

Justin A. Lemkul jalemkul at vt.edu
Thu Feb 24 14:45:17 CET 2011

gromacs564 wrote:
> Hi Erik and Justin
>    Thanks for your reply. I want to obtain the HBond's  permanence 
> time.May be it's occupancies that you said.
> So,could you send me the script?

The output you posted before suggested you were using my script for occupancy. 
Is this not the case?

Hydrogen bond lifetime can be computed with g_hbond, as Erik said before.


>    Thank you very much.


Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080


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