[gmx-users] Help please.

Dallas Warren Dallas.Warren at monash.edu
Thu Feb 24 23:03:06 CET 2011

Best place to start is to provide an exact copy paste of the command you
used, then an exact copy/paste of the error message.


A good resource for errors is
http://www.gromacs.org/Documentation/Errors and searching the emailing
list http://www.gromacs.org/Support/Mailing_Lists/Search 


Catch ya,

Dr. Dallas Warren

Medicinal Chemistry and Drug Action

Monash Institute of Pharmaceutical Sciences, Monash University
381 Royal Parade, Parkville VIC 3010
dallas.warren at monash.edu

+61 3 9903 9304
When the only tool you own is a hammer, every problem begins to resemble
a nail. 


From: gmx-users-bounces at gromacs.org
[mailto:gmx-users-bounces at gromacs.org] On Behalf Of Brody Bessire
Sent: Friday, 25 February 2011 8:52 AM
To: gmx-users at gromacs.org
Subject: [gmx-users] Help please.


Hello all, 


I am an undergrad student and I am trying to learn how to run gromacs.
My computer knowledge is somewhat limited so please have patience with


I have been trying to run through the initial tutorial right now I am at
the preprocessing of cpeptide with grompp and I keep getting an error
stating that no molecules where defined in the system. What does that
mean? I can provide more detail if prompted but I dont even know what
direction to head in search of touble shooting. Thank you. 




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