[gmx-users] .gro to .pqr

Francesco Oteri francesco.oteri at gmail.com
Wed Jun 1 18:25:23 CEST 2011


Hi Mona,
You can try to convert your .gro file in .pdb. Then you can use 
pdb2pqr.py, that permits to assign atomic charges basing on AMBER or 
CHARMM force-field


Francesco

Il 01/06/2011 17:22, Justin A. Lemkul ha scritto:
>
>
> Mona Habibi wrote:
>>
>>  Hi Justin,
>>
>> Thank  you for quick answer, but I don't have the .tpr file, Is there 
>> any other way?
>>
>>
>
> No.  The only file format that contains all the information necessary 
> for a .pqr file (coordinates, charges, and radii) is a .tpr file.  
> Generating one is trivial; follow any tutorial.
>
> -Justin
>




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