[gmx-users] g_dist

[Nilesh Dhumal]

Hello,

I have a system with 128 emi (cations) and 128 Cl (anions).

I want to calculate how many CL atoms are in cutoff distance relative to
hydorgen aotm of cation.  I considered all CL atoms are distinguishable.

Basically I want to calcualte the distance between each CL atom and
correponing hydorgen and registered those CL atoms which are whthin
cutoff.

How can I do ?

I am using Gromacs 4.0.7 version.

Thanks

Nilesh