[gmx-users] query regarding g_ras command

rashi parihar rashi.parihar at gmail.com
Tue Jun 21 15:37:30 CEST 2011


thanx justin..my problem is that i do not know exactly the syntax of
command.i get to know about this command through this community only.i.e why
i want the full  command?

On Tue, Jun 21, 2011 at 6:53 PM, Justin A. Lemkul <jalemkul at vt.edu> wrote:

>
>
> rashi parihar wrote:
>
>> I want to obtain solvent accessible surface area using g_sas command:
>>
>>
>> g_sas -f *.xtc -s *.tpr -n *.ndx -o -or -oa.plz tell me the full command
>> as i am getting error while running this command.thanx in advance!!
>>
>>
>>
> To get an answer you need to provide an actual command and the actual error
> message.  There's nothing informative here.
>
> -Justin
>
>  how I will obtain three output files containing: area.xvg, resarea.xvg and
>> atomarea.xvg
>>
>>
>>
>> --
>>  images[12]
>>  “Many Smiles Begin Because Of Another Smile . . . ."
>>  Regards,
>> Rashi
>>
>>
> --
> ==============================**==========
>
> Justin A. Lemkul
> Ph.D. Candidate
> ICTAS Doctoral Scholar
> MILES-IGERT Trainee
> Department of Biochemistry
> Virginia Tech
> Blacksburg, VA
> jalemkul[at]vt.edu | (540) 231-9080
> http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin>
>
> ==============================**==========
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-- 

[image: images[12]]

“Many Smiles Begin Because Of Another Smile . . . ."

Regards,
Rashi
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