[gmx-users] Fwd: Regarding ffG43a1p force field

bharat gupta bharat.85.monu at gmail.com
Thu Jun 23 10:27:52 CEST 2011


Hi,

I want to simulate a docked complex of my protein (GFP) with
phosphotyrosine. I have found this - ffG43a1p forcefield contains parameters
for pTYR, so I want to know how good is this FF for simulating my system...
As in the literature its mentioned that people have used CHARMM, AMBER, OPLS
ff for simulation of GFP. So, using this will be a correct choice or not ...

-- 
Bharat
Ph.D. Candidate
Room No. : 7202A, 2nd Floor
Biomolecular Engineering Laboratory
Division of Chemical Engineering and Polymer Science
Pusan National University
Busan -609735
South Korea
Lab phone no. - +82-51-510-3680, +82-51-583-8343
Mobile no. - 010-5818-3680
E-mail : monu46010 at yahoo.com




-- 
Bharat
Ph.D. Candidate
Room No. : 7202A, 2nd Floor
Biomolecular Engineering Laboratory
Division of Chemical Engineering and Polymer Science
Pusan National University
Busan -609735
South Korea
Lab phone no. - +82-51-510-3680, +82-51-583-8343
Mobile no. - 010-5818-3680
E-mail : monu46010 at yahoo.com
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