[gmx-users] parallel running

Mark Abraham Mark.Abraham at anu.edu.au
Tue Mar 8 15:56:47 CET 2011

On 9/03/2011 1:51 AM, mohsen ramezanpour wrote:
> Dear Dr.Justin
> Thank you for your notice.
> I don't know the problem is related to MY COMMAND or to CLUSTER 
> please look at my commands and let me know the answer of this 
> question.just this.

The command you posted said that your compute environment could not find 
the GROMACS MPI-compiled executable on your cluster. Nobody here has any 
real ability to say why that is happening. You need to find out where 
that executable is, and how to access it. All of that information is 
local to you, and absent from us. Thus Justin said:

>     The administrators of your cluster should be able to tell you how
>     your system runs, what is installed, how things are configured,
>     etc.  Anything that anyone on this list would provide would be
>     generic advice, much of which is probably idle speculation that
>     may end up wasting your time.

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