[gmx-users] spectral density calculation with GROMACS

ZHANG Lu lyizl at ust.hk
Thu Mar 10 07:21:32 CET 2011

Dear all,
   I am now developing a set of force field parameters and I want to
calculate the spectral density with the normal mode analysis in GROMACS
to check my parameters.
   The point here is that I want to get a plot (spectral density VS
frequencies). Could anybody give me some slides or tutorials so that I
can follow it?
   Thank you in advance.


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