[gmx-users] ffamber99.hdb

Alexey Shvetsov alexxy at omrb.pnpi.spb.ru
Mon Mar 14 11:07:38 CET 2011


 Hi,

 How to write your hdb block is described in chapter 5.6.4 of 
 gromacs-4.5.3 manual

 On Mon, 14 Mar 2011 11:58:17 +0200, Yulian Gavrilov wrote:
> Dear gromacs users,
> Please, can you explain the structure of FFAMBER99.HDB file
>
> For example,
> LYN    7
> 1    1    H    N    -C    CA   
> 1    5    HA    CA    N    CB    C   
>  2    6    HB    CB    CA    CG   
> 2    6    HG    CG    CB    CD   
> 2    6    HD    CD    CG    CE   
> 2    6    HE    CE    CD    NZ   
> 2    3    HZ    NZ    CE    CD
>
>  Sincerely,
>
> Yulian Gavrilov

-- 
 Best Regards,
 Alexey 'Alexxy' Shvetsov
 Petersburg Nuclear Physics Institute, Russia
 Department of Molecular and Radiation Biophysics
 Gentoo Team Ru
 Gentoo Linux Dev
 mailto:alexxyum at gmail.com
 mailto:alexxy at gentoo.org
 mailto:alexxy at omrb.pnpi.spb.ru



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