[gmx-users] including non standard amino acid CSD in topology file

[Justin A. Lemkul]

ashutosh srivastava wrote:
> hello
> 
> I am using OPLS AA FF and my  protein contains a non standard amino acid 
> CSD for which the topology parameters are not present  . Can someone 
> tell how to include CSD into topology file?
> 

http://www.gromacs.org/Documentation/How-tos/Adding_a_Residue_to_a_Force_Field

-Justin

> 
> ashu
> 

-- 
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Justin A. Lemkul
Ph.D. Candidate
ICTAS Doctoral Scholar
MILES-IGERT Trainee
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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