[gmx-users] Re: change in structure after simulation

[bharat gupta]

Hi,

I did a simulation of 5ns ... after viewing the trajectory in VMD , some
loop regions seems to be stretched like a straight wire.. But when I made a
movie using trjconv and viewed in pymol.. the structure seems to be fine..
So, shall I continue my analysis assuming the structure to be fine ...

-- 
Bharat
Ph.D. Candidate
Room No. : 7202A, 2nd Floor
Biomolecular Engineering Laboratory
Division of Chemical Engineering and Polymer Science
Pusan National University
Busan -609735
South Korea
Lab phone no. - +82-51-510-3680, +82-51-583-8343
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E-mail : monu46010 at yahoo.com
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